Aryeh Warmflash: search on Z-Library

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1

Dissecting the dynamics of signaling events in the BMP, WNT, and NODAL cascade during self-organized fate patterning in human gastruloids

Chhabra, Sapna, Liu, Lizhong, Goh, Ryan, Kong, Xiangyu, Warmflash, Aryeh, Lowell, Sally

Journal:

Year:

2019

Language:

english

File:

PDF, 17.62 MB

english, 2019

2

A novel self-organizing embryonic stem cell system reveals signaling logic underlying the patterning of human ectoderm

Britton, George, Heemskerk, Idse, Hodge, Rachel, Qutub, Amina A., Warmflash, Aryeh

Journal:

Development (The Company of Biologists)

Year:

2019

File:

PDF, 29.18 MB

2019

3

Stem-cell-based embryo models for fundamental research and translation

Fu, Jianping, Warmflash, Aryeh, Lutolf, Matthias P.

Journal:

Nature Materials

Year:

2020

File:

PDF, 4.46 MB

2020

4

The molecular circuitry underlying pluripotency in embryonic stem cells

Aryeh Warmflash, Brigitte L. Arduini, Ali H. Brivanlou

Journal:

Wiley Interdisciplinary Reviews: Systems Biology and Medicine

Year:

2012

Language:

english

File:

PDF, 223 KB

english, 2012

5

Multilineage Transcriptional Priming and Determination of Alternate Hematopoietic Cell Fates

Peter Laslo, Chauncey J. Spooner, Aryeh Warmflash, David W. Lancki, Hyun-Jun Lee, Roger Sciammas, Benjamin N. Gantner, Aaron R. Dinner, Harinder Singh

Journal:

Year:

2006

Language:

english

File:

PDF, 788 KB

english, 2006

6

Umbrella sampling for nonequilibrium processes

Warmflash, Aryeh, Bhimalapuram, Prabhakar, Dinner, Aaron R.

Journal:

The Journal of Chemical Physics

Year:

2007

Language:

english

File:

PDF, 553 KB

english, 2007

7

A method to recapitulate early embryonic spatial patterning in human embryonic stem cells

Warmflash, Aryeh, Sorre, Benoit, Etoc, Fred, Siggia, Eric D, Brivanlou, Ali H

Journal:

Year:

2014

Language:

english

File:

PDF, 1.76 MB

english, 2014

8

Encoding of Temporal Signals by the TGF-β Pathway and Implications for Embryonic Patterning

Sorre, Benoit, Warmflash, Aryeh, Brivanlou, Ali H., Siggia, Eric D.

Journal:

Developmental Cell

Year:

2014

Language:

english

File:

PDF, 2.41 MB

english, 2014

9

Field theoretic treatment of an effective action for a model of catalyzed autoamplification

Tchernookov, Martin, Warmflash, Aryeh, Dinner, Aaron R.

Journal:

Physical Review E

Year:

2010

Language:

english

File:

PDF, 165 KB

english, 2010

10

SMAD7 Directly Converts Human Embryonic Stem Cells to Telencephalic Fate by a Default Mechanism

Ozair, Mohammad Zeeshan, Noggle, Scott, Warmflash, Aryeh, Krzyspiak, Joanna Ela, Brivanlou, Ali H.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.66 MB

english, 2013

11

Pareto evolution of gene networks: an algorithm to optimize multiple fitness objectives

Warmflash, Aryeh, Francois, Paul, Siggia, Eric D

Journal:

Physical Biology

Year:

2012

Language:

english

File:

PDF, 5.17 MB

english, 2012

12

How noise statistics impact models of enzyme cycles

Warmflash, Aryeh, Adamson, David N., Dinner, Aaron R.

Journal:

The Journal of Chemical Physics

Year:

2008

Language:

english

File:

PDF, 686 KB

english, 2008

13

Nonequilibrium umbrella sampling in spaces of many order parameters

Dickson, Alex, Warmflash, Aryeh, Dinner, Aaron R.

Journal:

The Journal of Chemical Physics

Year:

2009

Language:

english

File:

PDF, 3.25 MB

english, 2009

14

Critical behavior of a model for catalyzed autoamplification

Tchernookov, Martin, Warmflash, Aryeh, Dinner, Aaron R.

Journal:

The Journal of Chemical Physics

Year:

2009

Language:

english

File:

PDF, 117 KB

english, 2009

15

Separating forward and backward pathways in nonequilibrium umbrella sampling

Dickson, Alex, Warmflash, Aryeh, Dinner, Aaron R.

Journal:

The Journal of Chemical Physics

Year:

2009

Language:

english

File:

PDF, 1.42 MB

english, 2009

16

Signaling dynamics and embryonic development

Warmflash, Aryeh, Siggia, Eric D., Brivanlou, Ali H.

Journal:

Year:

2012

Language:

english

File:

PDF, 416 KB

english, 2012

17

Pluripotent stem cells as a model for embryonic patterning: From signaling dynamics to spatial organization in a dish

Heemskerk, Idse, Warmflash, Aryeh

Journal:

Developmental Dynamics

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

18

Self-organization of human embryonic stem cells on micropatterns

Deglincerti, Alessia, Etoc, Fred, Guerra, M Cecilia, Martyn, Iain, Metzger, Jakob, Ruzo, Albert, Simunovic, Mijo, Yoney, Anna, Brivanlou, Ali H, Siggia, Eric, Warmflash, Aryeh

Journal:

Nature Protocols

Year:

2016

Language:

english

File:

PDF, 1.92 MB

english, 2016

19

Synthetic Embryos: Windows into Mammalian Development

Warmflash, Aryeh

Journal:

Year:

2017

Language:

english

File:

PDF, 174 KB

english, 2017

20

Morphogen and community effects determine cell fates in response to BMP4 signaling in human embryonic stem cells

Nemashkalo, Anastasiia, Ruzo, Albert, Heemskerk, Idse, Warmflash, Aryeh

Journal:

Development (The Company of Biologists)

Year:

2017

Language:

english

File:

PDF, 9.46 MB

english, 2017

21

S-MiRAGE: A quantitative, secreted RNA-based reporter of gene expression and cell persistence

Mitra, Kinshuk, Feist, William, Anfossi, Simone, Fuentes-Mattei, Enrique, Almeida, Maria Ines, Kim, Jean J, Calin, George, Warmflash, Aryeh

Journal:

ACS Synthetic Biology

Year:

2018

Language:

english

File:

PDF, 22.76 MB

english, 2018